Parallel spectral clustering based on map reduce pdf

Designing an efficient parallel spectral clustering. In practice spectral clustering is very useful when the structure of the individual clusters is highly nonconvex or more generally when a measure of the center and spread of the cluster is not a suitable description of the complete cluster. Parallel spectral clustering in distributed systems, ieee transactions on pattern analysis and machine intelligence, 333. We are expecting to present a highly optimized parallel implemention of all the steps of spectral clustering. Spectral clustering algorithm has been shown to be more effective in finding clusters than most traditional algorithms. Spectral clustering techniques have seen an explosive development and. Parallel spectral clustering in distributed systems. Mapreduce is a programming model that allows easy development of scalable parallel applications to process big data on large clusters of commodity machines. Although these methods can reduce computational time, they trade clustering accuracy for com. Parallel spectral clustering in distributed techylib. Parallel based on cloud computing to achieve large data sets. In this paper, we show how the parallel co clustering with augmented matrices pccam algorithm can be designed on the map reduce framework.

The proposed map reduce paradigm based clustering algorithm improves the traditional cluster algorithm in a parallelized way. Our implementation makes use of the advantages of mapreduce and provides a spectral clustering method that can handle large graphs in a reasonable time. The proposed approach has been tested and evaluated on largescale log data. Parallel spectral clustering algorithm based on hadoop chapter 1 introduction 1. Accurate spectral clustering for community detection in. Community discovery by propagating local and global. The approximate optimal solution is obtained by solving the eigenvectors of. This method includes a parallel clustering method parc method and a sampleandignore method sni method. Chang abstract spectral clustering algorithms have been shown to be more effective in. We describe different graph laplacians and their basic properties, present the most common spectral clustering algorithms, and derive those algorithms from scratch by several different approaches.

As an unsupervised learning technique mainly for discovering natural groups or underlying structure of a given dataset, clustering has been an active research subject in many fields including statistical analysis, image analysis, pattern recognition, machine learning, and. Spectral algorithms georgia institute of technology. Parallel spectral clustering algorithm for largescale. Second, the effectiveness of the mapreduce based mregwo is vindicated in terms of fmeasure against the four stateoftheart mapreduce based clustering methods namely parallel kmeans pkmeans, parallel kpso based on mapreduce parallel kpso, mapreduce based artificial bee colony optimization for large scale data clustering mrabc and. Research open access efficient parallel spectral clustering. In order to deal with the problem, more researchers try to design efficient parallel clustering algorithms. The similarity matrix is provided as an input and consists of a quantitative assessment of the relative similarity of each pair of points in the dataset. The top row, from left to right, displays the similarity matrix s, the random walk matrix. The map job is a preprocessing of the split data where each split part is considered as a value to which a key is attributed, all values with the same key are submitted to the same reducer. In order to improve the efficiency of spatial clustering for large scale data, many researchers proposed several efficient clustering algorithms in parallel. The model allows clustering validation in a parallel and a distributed manner using map reduce framework, it is termed mrcentropy.

Landmark selection for spectral clustering based on. The aim is to be able to scale with increasing dataset sizes. The time complexity of calculating the eigenvalue decomposition of the similarity matrix is onzk iiter. A parallel kmedoids algorithm for clustering based on. Recall that the input to a spectral clustering algorithm is a similarity matrix s2r n and that the main steps of a spectral clustering algorithm are 1.

Since markov chains tend to mix much more quickly on unimodal distributions than on. To improve the efficiency of this algorithm, many variants have been developed. Section 5 discusses promising directions for future research. Another example is pegasus, a big graph mining tool.

Recently, a new approach has started to get a lot of attention namely spectral methods. For instance when clusters are nested circles on the 2d plane. Complex cluster shapes kmeans performs poorly because it can only find spherical clusters density based approaches are sensitive to parameters spectral approach use similarity graphs to encode local neighborhood information data points are vertices of the graph connect points which are close 3 21. Consistency is a key property of statistical algorithms, when the data is drawn from some underlying probability distribution. Table 2 shows the time complexity of existing community detection methods. Mapreduce is taken as the most efficient model to deal with data intensive problems. The spectral methods for clustering usually involve taking the top eigen vectors of some matrix based on the distance between points or other properties and then using them to cluster the various points. Highperformance kmeans implementation based on a coarse.

Spectral clustering algorithm has been shown to be more effective in finding clusters. In this paper, we present a hybrid implementation of spectral clustering on a cpugpu heterogeneous platform. Parallel spectral clustering algorithm based on hadoop. More formally lets denote v as the whole dataset, after splitting the data we get v v 1. This article appears in statistics and computing, 17 4, 2007. Combined method for e ective clustering based on parallel som. The spectral methods for clustering usually involve taking the top eigen vectors of some matrix based on the distance between points or other properties and. However the algorithm is limited by the system and lacks flexibility. Parallel techniques are used to enhance the iclustering speed of the original algorithms. However, spectral clustering suffers from a scalability problem in both memory use and computational time when the. It is based on userspecified map and reduce functions. Parallel isodata clustering of remote sensing images based. Abstract the kmeans algorithm is one of the most common clustering.

The study of clustering methods based on large scale data is considered as an important task. Parallel power iteration clustering for big data, models and algorithms for high performance distributed data mining, 733. Parallel kmeans clustering based on mapreduce ucsb. Recently, spectral clustering methods, which exploit. Specifically, in par3pkm, the incremental combiner function is executed between the map tasks and the reduce. Parallel implementation of fuzzy clustering algorithm based. Community discovery by propagating local and global information based on the mapreduce model kun guo, wenzhong guo, yuzhong chen, qirong qiu. As the number of cores increase, the runtime of parallel affinity propagation decreases greatly.

It is scalability and has a good acceleration capability, and by. Combined method for e ective clustering based on parallel som and spectral clustering luk a s voj a cek, jan martinovi c, kate rina slaninov a, pavla dr a zdilov a, and ji r dvorsky department of computer science, v sb technical university of ostrava, ostrava, czech republic lukas. Onepass mapreducebased clustering method for mixed large. Parallel swarm intelligence strategies for largescale. But, before this will give a brief overview of the literature in section1. Efficient parallel spectral clustering algorithm design for. Spectral clustering involves using the fiedler vector to create a bipartition of the graph. The initialization algorithm to decrease the number of iterations is combined with the mapreduce framework. In the rst part, we describe applications of spectral methods in algorithms for problems from combinatorial optimization, learning, clustering, etc.

Specifically, in par3pkm, the incremental combiner function is. Spectral clustering has been successfully applied on large graphs by first identifying their community structure, and then clustering communities. A novel clustering method using enhanced grey wolf. Surprisingly, despite decades of work, little is known about consistency of most clustering algorithms. Parallel spectral clustering, distributed computing.

The algorithm has been defined regarding mapreduce jobs, showing a way of how to adapt a nonembarrassingly parallel algorithm to a platform that is dedicated to embarrassingly parallel methods. Spectral clustering algorithm has proved be more effective than most traditional algorithms in finding clusters. Both implementations were targeted for clusters, and. A parallel implementation of fuzzy cmeans algorithm into. Jun 01, 2015 parallel spectral clustering in distributed systems, ieee transactions on pattern analysis and machine intelligence, 333.

Spectral clustering stages preprocessing construct the graph and the similarity matrix representing the dataset. Spectral clustering based on similarity and dissimilarity. Spectral clustering of a synthetic data set with n 30 points and k 3 clusters of sizes 15, 10 and 5. The resulting cluster quality is better than that of kmeans. There are of researchdeal es on the first three methods, and the spectral clustering is less yet xing et al. Section 3 describes our parallel spectral clustering algorithm. Parallel spectral clustering wenyen chen, yangqiu song, hongjie bai, chihjen lin, edward y. Pdf spectral clustering algorithms have been shown to be more effective in. A fast parallel clustering algorithm for large spatial databases. In 24, a kdtree was implemented on hadoop, while in 25, a fast parallel kmeans clustering algorithm was developed based on mapreduce. In multivariate statistics and the clustering of data, spectral clustering techniques make use of the spectrum eigenvalues of the similarity matrix of the data to perform dimensionality reduction before clustering in fewer dimensions.

However, spectral clustering suffers from a scalability problem in both memory use and. Parallel black hole clustering based on mapreduce request pdf. However,spectral clustering suffers from a scalability problem in both memory use and computational time when the size of a data. Research on parallel dbscan algorithm design based on. This article first introduced the parallel spectral clustering algorithm research background and significance, and then to hadoop the cloud computing framework. Both implementations were targeted for clusters, and involve frequent data communications which will clearly constrain the overall performance.

International journal of digital content technology and its applications. Googles mapreduce or its opensource equivalent hadoop is a powerful tool for building such applications. The similarity information is then used to group these points into kclusters. Landmark selection for spectral clustering based on weighted pagerank. Different from existing multiview spectral clustering methods, mvscn is a deep mvsc which implements the deep neural networks as a parametric function asf. Spectral clustering is an algorithm based on graph theory, it does not demand the shape of clusters and converges to the global optimum.

This tutorial is set up as a selfcontained introduction to spectral clustering. In table 2, na represents the runtime of that data set is not available because of the limitation of the memory size. Clustering has always been a hard problem and an active topic of research. Chang abstract spectral clustering algorithm has been shown to be more effective in. Pdf spectral clustering algorithm has been shown to be more effective in. A parallel clustering method study based on mapreduce. Pdf parallel spectral clustering in distributed systems. Parallel clustering algorithm for largescale biological. Paper 11 used multicore cpu platform to improve the clustering speed. In this paper, parallel clustering method based on mapreduce is studied.

Parallel spectral clustering algorithm based on hadoop arxiv. However, spectral clustering suffers from a scalability problem in both memory use and computational time when a dataset size is large. Spectral clustering summary algorithms that cluster points using eigenvectors of matrices derived from the data useful in hard nonconvex clustering problems obtain data representation in the lowdimensional space that can be easily clustered variety of methods that use eigenvectors of unnormalized or normalized. Paper 12 presented a fast clustering algorithm based on gpu graphics processing unit. For example, some scholars have proposed parallel density based clustering algorithms using the mapreduce technique 28, such as mrdbscan 29 and dbcuremr 30. A high performance implementation of spectral clustering. We use parpack as underlying eigenvalue decomposition package and f2c to compile fortran code.

Advantages and disadvantages of the different spectral clustering algorithms are discussed. The clara is a medoid based clustering algorithm which unlike centroid based chooses real data points as centers. The experimental work shows that the input format, the number of blocks, and the number of reducers can greatly affect the overall performance. Mapreduce algorithms for big data analysis springerlink. Efficient parallel spectral clustering algorithm design. Fast density clustering strategies based on the kmeans. Clustering is a process of organizing data into groups within which the elements are similar in some way. An improved parallel kmeans algorithm based on mapreduce.

Classical clustering methods are out of reach in practice in face of big data. Parallel coclustering with augmented matrices algorithm with. Kway spectral clustering algorithm preprocessing compute laplacian matrix l decomposition find the eigenvalues and eigenvectors of l build embedded space from the eigenvectors corresponding to the k smallest eigenvalues clustering apply kmeans to the reduced n x k space to produce k clusters 29. The clustering assumption is to maximize the within cluster similarity and simultaneously to minimize the between cluster similarity for a given unlabeled dataset.

The experimental results demonstrate that the proposed algorithm can scale well and. In this paper, a novel hierarchical clustering method is presented as well as its parallel implementation based on mapreduce framework. Dynamic island model based on spectral clustering in. A novel parallel hierarchical community detection method. Nonetheless, all the aforementioned methods work on infrastructures with multiple computational nodes, which are beyond of this articles scope.

The proposed method, asc, is compared to the classical spectral clustering and two stateoftheart accelerating methods, i. Parallel kmeans clustering of remote sensing images based on mapreduce 163 kmeans, however, is considerable, and the execution is timeconsuming and memoryconsuming especially when both the size of input images and the number of expected classifications are large. Accurate spectral clustering for community detection in mapreduce. It is based on parallel kmeans clustering, inherited from mapreduce paradigm, to be used for event segmentation. Parallel spatiotemporal spectral clustering with massive. The model allows clustering validation in a parallel and a distributed manner using mapreduce framework, it is termed mrcentropy. According to the experiment, with the processing data scale being enlarged, the clustering rate is in nearly linear growth, and the proposed parallel spectral clustering algorithm is suitable for. As a result, we propose a dynamic island model based on spectral clustering dimsp aiming to improve ef. Nov 24, 20 1 parallel spectral clustering in distributed systems wenyen chen,yangqiu song,hongjie bai,chihjen lin,edward y. Parallel spectral clustering algorithm design based on hadoop in the standard serial spectral clustering algorithms, we know that algorithm computational complexity is mainly presented in the construction of similar matrix, calculation of k minimum feature vectors in laplace matrix and kmeans the clustering. For cd40 and enolase data sets, the sequential algorithm runtime is obtained, so the speedup is. Nevertheless, good clustering algorithms are still extremely valuable and we can and should rewrite them for parallel clustering using a new map reduce paradigm lv et al.

In this paper, we propose a parallel dbscan clustering algorithm based on hadoop, which is a simple yet powerful parallel programming platform. In this paper, we propose a parallel kmeans clustering algorithm based on mapreduce. Table 2 and figure 2a show the runtime of the parallel clustering algorithm. However, complex policies make the control of exploration and exploitation more dif. We note that the clusters in figure lh lie at 900 to each other relative to the origin cf. International journal of digital content technology and its. In order to deal with the problem, many researchers try to design efficient parallel clustering algorithms. We consider a commonly used spectral clustering algorithm, proposed by ng et al.

Parallel markov chain monte carlo via spectral clustering. This paper combines the spectral clustering with mapreduce, through evaluation of sparse matrix eigenvalue and computation of distributed cluster, puts forward the improvement ideas and. Parallel kmeans clustering of remote sensing images based. Models for spectral clustering and their applications. Tsironis and sozio 16 proposed an implementation of spectral clustering based on mapreduce. A new agglomerative hierarchical clustering algorithm implementation based on the map reduce framework. Map each point to a lowerdimensional representation based on one or more eigenvectors. Spectral representation form the associated laplacian matrix compute eigenvalues and eigenvectors of the laplacian matrix. In the second part of the book, we study e cient randomized algorithms for computing basic spectral quantities such as lowrank approximations. Parallel kmans for clustering remote sensing images was reported by lv et al. Pdf parallel kmeans clustering of remote sensing images. This paper deals with a new spectral clustering algorithm based on a similarity and dissimilarity criterion by incorporating a dissimilarity criterion into the normalized cut criterion. Spectral clustering methods 41 transform community discovery into an optimization problem of a relaxed quadratic form. Parallel kmeans clustering of remote sensing images based on.

In this work, based on a mapreduce framework, the timeconsuming iterations of the proposed par3pkm algorithm are performed in three phases with the map function, the combiner function, and the reduce function, and the parallel computing process of mapreduce is shown in figure 4. Parallel markov chain monte carlo via spectral clustering is to replace a single markov chain targeting a highly multimodal distribution with several markov chains, each targeting distinct unimodal distributions. But once we map the points to jrk ys rows, they form tight clusters figure lh from which our method obtains the good clustering shown in figure ie. In section 4, we present our parallel spectral clustering algorithm and we mark some technical issues and our contributions to the problem.